Search |  Contact |  SRI Home Do not follow this link, or your host will be blocked from this site. This is a spider trap. Do not follow this link, or your host will be blocked from this site. This is a spider trap. Do not follow this link, or your host will be blocked from this site. This is a spider trap.A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A ASRI International.  333 Ravenswood Avenue.  Menlo Park, CA 94025-3493. SRI International is a nonprofit corporation.

Publications Search Results

The following are sorted by reverse chronological order of publication.

14 publications found:

  • Weaver D.S., Keseler I.M., Mackie A., Paulsen I.T., Karp P.D. A Genome-Scale Metabolic Flux Model of E. coli K--12 Derived from the EcoCyc Database. BMC Systems Biology, 2014.  [Details]

  • Keseler, I.M., Collado-Vides, J., Santos-Zavaleta, A., Peralta-Gil, M., Gama-Castro, S., Muniz-Rascado, L., Bonavides-Martinez, C., Paley, S., Krummenacker, M., Altman, T., Kaipa, P., Spaulding, A., Pacheco, J., Latendresse, M., Fulcher, C., Sarker, M., Shearer, A.G., Mackie, A., Paulsen, I., Gunsalus, R.P., and Karp, P.D. EcoCyc: a comprehensive database of Escherichia coli biology. Nucleic Adics Research, vol. 39, pp. D583-90, 2011.  [PDF, Details]

  • Keseler, I.M. and Bonavides-Martinez, C. and Collado-Vides, J. and Gama-Castro, S. and Gunsalus, R.P. and Johnson, D.A. and Krummenacker, M., and Nolan, L.M. and Paley, S. and Paulsen, I.T. and Peralta-Gil, M. and Santos-Zavaleta, A. and Shearer, A.G. and Karp, P.D. EcoCyc: a comprehensive view of Escherichia coli biology. Nucleic Acids Research, vol. 37, pp. D464-D470, Jan 2009.  [PDF, Details]

  • Keseler, I.M. and Collado-Vides, J. and Gama-Castro, S. and Ingraham, J. and Paley, S. and Paulsen, I.T. and Peralta-Gil, M. and Karp, P.D. EcoCyc: a comprehensive database resource for Escherichia coli. Nucleic Acids Research, vol. 33, pp. D334-D337, Jan 2005.  [PDF, Details]

  • Karp P.D., Arnaud M., Collado-Vides J., Paulsen I.T., Saier M.H. Jr. The E. coli EcoCyc Database: No Longer Just a Metabolic Pathway Database. ASM News, vol. 70, no. 1, pp. 25-30, 2004.  [Details]

  • Karp, P.D., Riley, M., Saier, M., Paulsen, I.T., Collado-Vides, J., Paley, S., Pellegrini-Toole, A., Bonavides, C., and Gama-Castro, S. The EcoCyc Database. Nucleic Acids Research, vol. 30, no. 1, pp. 56-58, 2002.  [PDF, Details]

  • Karp, P.D., Riley, M., Paulsen, I.T., Paley, S., Pellegrini-Toole, A. The EcoCyc and MetaCyc Databases. Nucleic Acids Research, vol. 28, no. 1, pp. 56-59, 2000.  [PDF, Details]

  • Karp P.D. Using the EcoCyc Databasein Nucleic Acid and Protein Databases and How To Use Them, Academic Press, 1999.  [Details]

  • Karp, P.D. EcoCyc: The Resource and the Lessons Learnedin Bioinformatics Databases and Systems, pp. 47-62, Kluwer Academic Publishers, 1999.  [Details]

  • Karp P., Riley M., Paley A., Krummenacker M. EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism. Nuc Acids Res, vol. 27, no. 1, pp. 55-58, 1999.  [Details]

  • Karp P., Riley M., Paley A., Krummenacker M. EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism. Nuc Acids Res, vol. 26, no. 1, pp. 50-53, 1998.  [Details]

  • Karp, P. and Riley, M. and Paley, S. and Pellegrini-Toole, A. and Krummenacker, M. EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism. Nuc. Acids Res., vol. 25, no. 1, 1997.  [PDF, Details]

  • Karp, P. and Riley, M. and Paley, S. and Pellegrini-Toole, A. EcoCyc: Electronic Encyclopedia of E. coli Genes and Metabolism. Nuc. Acids Res., vol. 24, no. 1, pp. 32–39, 1996.  [PDF, Details]

  • Paley, S. and Karp, P.D. Adapting EcoCyc for Use on the World Wide Web. Gene, vol. 172, no. 1, pp. GC43-50, 1996.  [PDF, Details]

  • SRI International
    ©2014 SRI International 333 Ravenswood Avenue, Menlo Park, CA 94025-3493
    SRI International is an independent, nonprofit corporation. Privacy policy