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Pathway Tools

Pathway Tools  Principal Investigator:  Peter D Karp

Mailing address:
AI Center
SRI International
333 Ravenswood Avenue
Menlo Park, CA 94025-3493

AIC Program:  Bioinformatics Research Group

Project home page at http://bioinformatics.ai.sri.com/ptools/

   Project Description

[Project home page]

   Personnel

Name Title E-mail
Altman, Tomer Scientific Application Programmer
Billington, Richard Senior Software Engineer
Gobbel, Randy Alumnus
Holland, Tim Software Engineer
Karp, Peter D Director, Bioinformatics Research Group
Krummenacker, Markus Bioinformatics Scientist
Latendresse, Mario Computer Scientist
Lee, Thomas (Tom) J Senior Research Engineer
Ong, Quang Scientific Application Programmer
Paley, Suzanne Computer Scientist
Pick, John Alumnus
Romero, Pedro R Alumnus
Subhraveti, Pallavi Scientific Programmer
Travers, Mike Alumnus

   Publications
  • Karp PD, Paley SM, Krummenacker M, Latendresse M, Dale JM, Lee TJ, Kaipa P, Gilham F, Spaulding A, Popescu L, Altman T, Paulsen I, Keseler IM, Caspi R. Pathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology.. Brief Bioinform., vol. 11, no. 1, pp. 40-79, Jan 2010.  [PDF, Details]

  • Karp, P.D. and Paley, S. and Romero, P. The Pathway Tools Software. Bioinformatics, vol. 18, pp. S225-S232, 2002.  [Details]

  • Paley, S. and Karp, P.D. Evaluation of computational metabolic-pathway predictions for Helicobacter pylori.. Bioinformatics, vol. 18, no. 5, pp. 715-24, May 2002.  [Details]

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