Search |  Contact |  SRI Home Do not follow this link, or your host will be blocked from this site. This is a spider trap. Do not follow this link, or your host will be blocked from this site. This is a spider trap. Do not follow this link, or your host will be blocked from this site. This is a spider trap.A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A A ASRI International.  333 Ravenswood Avenue.  Menlo Park, CA 94025-3493. SRI International is a nonprofit corporation.

BioCyc Database Collection

BioCyc  Principal Investigator:  Peter D Karp

Mailing address:
AI Center
SRI International
333 Ravenswood Avenue
Menlo Park, CA 94025-3493

AIC Program:  Bioinformatics Research Group

Project home page at http://biocyc.org/

   Project Description

[Project home page]

   Personnel

Name Title E-mail
Altman, Tomer Scientific Application Programmer
Caspi, Ron Scientific Database Curator
Holland, Tim Software Engineer
Karp, Peter D Director, Bioinformatics Research Group
Keseler, Ingrid M Senior Scientific Database Curator
Kothari, Anamika Scientific Datatabase Curator
Krummenacker, Markus Bioinformatics Scientist
Ong, Quang Scientific Application Programmer
Paley, Suzanne Computer Scientist
Pick, John Alumnus
Subhraveti, Pallavi Scientific Programmer

   Publications

Showing most recent 5 out of 9  [View All]

  • 7. Caspi R, Altman T, Dreher K, Fulcher CA, Subhraveti P, Keseler IM, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Ong Q, Paley S, Pujar A, Shearer AG, Travers M, Weerasinghe D, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases. Nucleic Acids Res, vol. 40, no. D1, pp. D742-D753, 2012.  [PDF, Details]

  • Caspi R, Altman T, Dale JM, Dreher K, Fulcher CA, Gilham F, Kaipa P, Karthikeyan AS, Kothari A, Krummenacker M, Latendresse M, Mueller LA, Paley S, Popescu L, Pujar A, Shearer AG, Zhang P, Karp PD. The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases.. Nucleic Acids Res, vol. 38, pp. D473-D479, 2010.  [PDF, Details]

  • Caspi R and Karp PD. Using the MetaCyc pathway database and the BioCyc database collection. Curr Protoc Bioinformatics, vol. 20, pp. 1.17.1-1.17.51, 2007.  [Details]

  • Caspi R, Foerster H, Fulcher C. A, Kaipa P, Krummenacker M, Latendresse M, Paley S, Rhee S. Y, Shearer A. G, Tissier C, Walk T. C, Zhang P, Karp P. D. The MetaCyc Database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases. Nucleic Acids Research, vol. 36, pp. D623-D631, 2007.  [PDF, Details]

  • Karp, P.D. Pathway Databases: A Case Study in Computational Symbolic Theories. Science, vol. 293, pp. 2040-4, 2001.  [Details]

SRI International
©2013 SRI International 333 Ravenswood Avenue, Menlo Park, CA 94025-3493
SRI International is an independent, nonprofit corporation. Privacy policy